San Diego Citizen Watershed Monitoring Consortium Saturday, 11th October 
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SDCWMC > Watersheds

Santa Margarita Watershed

Map of Santa Margarita watershed


The Santa Margarita River watershed encompasses approximately 750 square miles in northern San Diego and southwestern Riverside counties. The watershed contains a variety of nearly intact habitats including chaparral-covered hillsides, riparian woodlands, and coastal marshes. Of the total watershed area, approximately 27% is within San Diego County.

The Santa Margarita River is formed near the City of Temecula in Riverside County at the confluence of the Temecula and Murrieta creek systems. Once formed, the majority of the Santa Margarita River main stem flows within San Diego County through unincorporated areas, the community of Fallbrook, and the Marine Corps Base Camp Pendleton.

The lower river and estuary have largely escaped the development typical of other regions of coastal Southern California, and are therefore able to support a relative abundance of functional habitats and wildlife. On the other hand, the upper watershed basin lies in Riverside County, one of the fastest growing areas in California. In the absence of effective planning measures, this rapid development will likely exasperate surface water quality problems.
Hydrologic Areas: Ysidora, DeLuz, Murrieta, Auld, Pechanga, Wilson, Cave Rocks, Aguanga, Oakgrove
Major Water Bodies: Santa Margarita River, Temecula Creek, Murrieta Creek, Santa Margarita Lagoon, Vail Lake, Skinner Reservoir, and Diamond Valley Lake Reservoir

If you would like to select one of these major water bodies as your collection site, follow these instructions to get the information you will need for the registration form:

  • Copy the name of the water body (e.g., San Marcos Creek).
  • Go to www.topozone.com and paste the water body name in the place name field.
  • Select CA and click the Search button. The results will look similar to the screenshot below: www.topozone.com results for San Onofre Creek

    The information you will need to write down or copy from the results are:

    • Type: the water body type.
    • USGS Quad: the Nearest City field on the registration form.
    • Lat: the latitude.
    • Lon: the longitude.
  • Enter the information into the Collection Site Information section of the registration form.

If you need assistance in selecting a collection site, please contact us. We'll be happy to help you find a site that's as close to your group' or school's location as possible.